Objectives:
To implement a computational infrastructure for the integrative analysis of disparate highthroughput methodologies (i.e. genomics and proteomics). This infrastructure will form the core of the OPATHY database and will be oriented to enable data-driven discoveries of new biomarkers of yeast infections, by exploiting the data produced in OPATHY and elsewhere. She/he will also use this infrastructure in combination with data-mining approaches to highlight biomarker candidates.
Methodology:
We will use standard methods on a Linux operative system using the languages php and Java in combination with MySQL and Wikimedia database architecture templates. Data-mining will be based on ontologies
An overview of the project can be downloaded here:
